It seems that the Column Constraint does not apply when selecting the quick filter. When 3 stories are in the status In Progress with a maximum of 2 issue counts, it turns red. However, it keeps red even after applying the quick filter which returns zero results for the status In Progress.

Before quick filter applied:

After quick filter applies:

The expectation would be that the red color disappear if the amount of issues/stories appear in the column is not more than max issue counts.