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Type: Bug
Resolution: Duplicate
Priority: Low
Fix Version/s: None
Affects Version/s: 8.11.0, 8.13.0
Component/s: System Administration - Others, UPM (Universal Plugin Manager)
Labels:
- raid

Introduced in Version:
8.11
Support reference count:
5
Symptom Severity:
Severity 3 - Minor
UIS:
11
Bug Fix Policy:
View Atlassian Server bug fix policy

Atlassian Update - 25 02 2021

After some analysis we've found that this issue has been duplicated by the issue at JRASERVER-71473 – Package Scanner found duplicates for Atlassian packages.
This is a verified bug in Jira and was resolved on version 8.15.0 – see the release notes.

Issue Summary

Several warnings appear during startup about duplicated packages.

Steps to Reproduce

Start Jira
Look at the atlassian-jira.log file, after the Jira plugin system starts.

Expected Results

The plugin system starts without issues.

Actual Results

The following warnings appear every time Jira starts:

   ___ Starting the JIRA Plugin System _________________
    
2020-09-21 17:50:36,162+0800 JIRA-Bootstrap INFO      [c.a.plugin.manager.DefaultPluginManager] Plugin system earlyStartup begun
2020-09-21 17:50:36,175+0800 JIRA-Bootstrap INFO      [c.a.jira.cluster.ClusterSettings] [CLUSTER-STATE] Value for system property key jira.cluster.retention.period.in.days was set to PT48H 
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.util.logging' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.util' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'javax.mail.internet' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.imap.protocol' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'javax.mail.event' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'javax.mail.util' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.handlers' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.pop3' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.auth' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'javax.mail' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.iap' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.imap' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.sun.mail.smtp' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,251+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'javax.mail.search' with different versions. Files: jakarta.mail-1.6.5.jar and javax.mail-1.6.2.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\jakarta.mail-1.6.5.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\javax.mail-1.6.2.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.clover' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.greenhopper' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.stash' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.bamboo' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.crucible' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.fisheye' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.confluence' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.crowd' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.jira' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'
2020-09-21 17:50:38,252+0800 JIRA-Bootstrap WARN      [o.twdata.pkgscanner.ExportPackageListBuilder] Package Scanner found duplicates for package 'com.atlassian.extras.api.plugin' with different versions. Files: atlassian-extras-3.2.jar and atlassian-extras-api-3.3.0.jar
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-3.2.jar'
      'C:\JIRA\JIRA8.11.0\atlassian-jira\WEB-INF\lib\atlassian-extras-api-3.3.0.jar'

Notes:

This does not occur in jira 7.13.9
It does not seem to cause any actual disruption in the functions of Jira, as far as we can tell.

Workaround

Currently there is no known workaround for this behavior. A workaround will be added here when available

duplicates

JRASERVER-71473 Package Scanner found duplicates for atlassian packages

Closed

mentioned in: Page Loading...; Page Loading...

Details

Description

Issue Summary

Steps to Reproduce

Expected Results

Actual Results

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