Steps to Reproduce:

1. Create a copy of the Default Workflow;
2. Create a Workflow Scheme;
3. Associate the Workflow Scheme with the Workflow and with a Project;
4. Modify the Workflow and add a property to the Closed step - e.g.:

   jira.permission.work.denied = denied
   

5. Publish the workflow draft;
6. Transition an issue to Closed and add Time Spent during the transition.

Desired Behavior:

• The issue would be transitioned to Closed;
• Logged work would be updated with the value added in the transition;
• It would not be possible to Log Work while the issue is Closed.

Actual Behavior:

The issue is transitioned to Closed;
Logged work is not updated with the value added in the transition;
It is not possible to Log Work while the issue is Closed.

The following also appears in the logs:

2013-08-05 14:37:50,208 http-bio-8090-exec-20 INFO matheus 877x11135x1 1gd0it9 X.X.X.X /secure/IssueAction!default.jspa [atlassian.jira.security.WorkflowBasedPermissionManager] work granted by permission scheme but DENIED by workflow

Apparently, the issue is being transitioned to Closed before JIRA updates the issue with the values from the transition.