This documentation: https://confluence.atlassian.com/display/FISHEYE/Migrating+to+MySQL+Enterprise+Server
does not have information about case sensitive setting in MySQL: http://dev.mysql.com/doc/refman/5.0/en/identifier-case-sensitivity.html

Migrating the MySQL database from one server to another server with mysqldump has cause the following error:

* Select Smart Commits, check all options and click Apply

An error occurred: com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: Table 'fecru.AO_8219D4_COMMIT_HOOK_CONFIG' doesn't exist 

* Select Web Hooks
    com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: Table 'fecru.AO_B434B9_WEB_HOOK' doesn't exist
    Table 'fecru.AO_B434B9_WEB_HOOK' doesn't exist

The workaround is either setting case insensitive setting lower_case_table_names=2 in MySQL server or renaming the tables to lowercase manually.

The documentation should have additional steps to check on the case sensitive setting in MySQL server.