Loading...

Type: Bug
Resolution: Fixed
Priority: Low
Fix Version/s: 8.0.0
Affects Version/s: 7.10.0, 7.10.1, 7.10.2
Component/s: Server - Upgrade Manager
Labels:

Support reference count:
8
Symptom Severity:
Severity 3 - Minor
UIS:
12
Bug Fix Policy:
View Atlassian Server bug fix policy

We don't plan to backport the fix for this bug to earlier Long Term Support versions

The fix for this bug isn't suitable for backporting to a bug fix release for any previous LTS versions. This is often because the fix is considered too high risk to implement in an older version.

The fix for this issue will be included in future Long Term Support versions.

Problem

Upgrading to Confluence 7.13.0 will fail when the database name involves a hyphen in MySQL Database

Environment

MySQL 8.0
JDBC driver 8.0.22

Steps to Reproduce

Setup MySQL 8.0 per this documentation
Install Confluence 7.10.0 with MySQL
Create the Confluence database name with a hyphen in it such as confl7100-test
Stop Confluence and upgrade to Confluence to 7.13.0

Expected Results

Confluence is upgraded successfully

Actual Results

Confluence upgrade fails with the error message below in atlassian-confluence.log

2021-09-21 12:28:59,129 ERROR [perm-delta-cache-receiver] [engine.jdbc.spi.SqlExceptionHelper] logExceptions Unknown column 'this_.external_id' in 'field list'

2021-09-21 12:28:59,146 ERROR [perm-delta-cache-receiver] [gatekeeper.evaluator.cache.CacheUpdateReceiver] error Failed to initialize evaluator cache
org.springframework.dao.InvalidDataAccessResourceUsageException: could not extract ResultSet; SQL [n/a]; nested exception is org.hibernate.exception.SQLGrammarException: could not extract ResultSet
	at org.springframework.orm.hibernate5.SessionFactoryUtils.convertHibernateAccessException(SessionFactoryUtils.java:228)
	at org.springframework.orm.hibernate5.HibernateTemplate.doExecute(HibernateTemplate.java:388)
	at org.springframework.orm.hibernate5.HibernateTemplate.execute(HibernateTemplate.java:337)
	at com.atlassian.crowd.embedded.hibernate2.HibernateGroupDao.internalFindByName(HibernateGroupDao.java:479)
	at com.atlassian.crowd.embedded.hibernate2.HibernateGroupDao.findByName(HibernateGroupDao.java:82)
	at com.atlassian.confluence.impl.user.crowd.CachedCrowdGroupDao.findGroupInternal(CachedCrowdGroupDao.java:78)
	at com.atlassian.confluence.impl.user.crowd.CachedCrowdGroupDao.lambda$findGroup$0(CachedCrowdGroupDao.java:101)
	at com.atlassian.confluence.cache.CacheOperations.lambda$get$0(CacheOperations.java:172)
	at java.base/java.util.HashMap.computeIfAbsent(HashMap.java:1133)
	at com.atlassian.confluence.cache.CacheOperations.get(CacheOperations.java:172)
	at com.atlassian.confluence.cache.DeferredOperationsCache.getOrLoad(DeferredOperationsCache.java:93)
	at com.atlassian.confluence.cache.DeferredOperationsCache.get(DeferredOperationsCache.java:57)
	at com.atlassian.confluence.cache.TransactionalCacheFactory$TransactionalCache.get(TransactionalCacheFactory.java:343)
	at com.atlassian.confluence.impl.cache.tx.TransactionAwareCache$1.get(TransactionAwareCache.java:43)
	at com.atlassian.confluence.impl.user.crowd.CachedCrowdGroupDao.findGroup(CachedCrowdGroupDao.java:101)
	at com.atlassian.confluence.impl.user.crowd.CachedCrowdGroupDao.findByName(CachedCrowdGroupDao.java:113)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:343)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:198)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163)
	at com.atlassian.spring.interceptors.SpringProfilingInterceptor.invoke(SpringProfilingInterceptor.java:16)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:295)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:98)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:212)
	at com.sun.proxy.$Proxy98.findByName(Unknown Source)
	at com.atlassian.crowd.directory.AbstractInternalDirectory.findGroupByName(AbstractInternalDirectory.java:709)
	at com.atlassian.crowd.directory.AbstractInternalDirectory.findGroupByName(AbstractInternalDirectory.java:64)
	at com.atlassian.crowd.manager.directory.DirectoryManagerGeneric.findGroupByName(DirectoryManagerGeneric.java:497)
	at com.atlassian.crowd.manager.application.canonicality.CanonicalEntityByNameFinder.findByName(CanonicalEntityByNameFinder.java:106)
	at com.atlassian.crowd.manager.application.canonicality.CanonicalEntityByNameFinder.findByName(CanonicalEntityByNameFinder.java:92)
	at com.atlassian.crowd.manager.application.canonicality.CanonicalEntityByNameFinder.findGroupByName(CanonicalEntityByNameFinder.java:66)
	at com.atlassian.crowd.manager.application.ApplicationServiceGeneric.findGroupByName(ApplicationServiceGeneric.java:653)
	at com.atlassian.crowd.embedded.core.CrowdServiceImpl.getGroup(CrowdServiceImpl.java:135)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:343)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:198)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163)
	at com.atlassian.spring.interceptors.SpringProfilingInterceptor.invoke(SpringProfilingInterceptor.java:16)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:295)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:98)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:212)
	at com.sun.proxy.$Proxy107.getGroup(Unknown Source)
	at com.atlassian.crowd.embedded.atlassianuser.EmbeddedCrowdGroupManager.getGroup(EmbeddedCrowdGroupManager.java:108)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:343)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:198)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163)
	at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:295)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:98)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:212)
	at com.sun.proxy.$Proxy145.getGroup(Unknown Source)
	at bucket.user.DefaultUserAccessor.getGroup(DefaultUserAccessor.java:257)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:343)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:198)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163)
	at com.atlassian.spring.interceptors.SpringProfilingInterceptor.invoke(SpringProfilingInterceptor.java:16)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:295)
	at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:98)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:212)
	at com.sun.proxy.$Proxy92.getGroup(Unknown Source)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at com.atlassian.plugin.util.ContextClassLoaderSettingInvocationHandler.invoke(ContextClassLoaderSettingInvocationHandler.java:26)
	at com.sun.proxy.$Proxy536.getGroup(Unknown Source)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:343)
	at org.eclipse.gemini.blueprint.service.importer.support.internal.aop.ServiceInvoker.doInvoke(ServiceInvoker.java:56)
	at org.eclipse.gemini.blueprint.service.importer.support.internal.aop.ServiceInvoker.invoke(ServiceInvoker.java:60)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.doProceed(DelegatingIntroductionInterceptor.java:136)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.invoke(DelegatingIntroductionInterceptor.java:124)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.eclipse.gemini.blueprint.service.util.internal.aop.ServiceTCCLInterceptor.invokeUnprivileged(ServiceTCCLInterceptor.java:70)
	at org.eclipse.gemini.blueprint.service.util.internal.aop.ServiceTCCLInterceptor.invoke(ServiceTCCLInterceptor.java:53)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.eclipse.gemini.blueprint.service.importer.support.LocalBundleContextAdvice.invoke(LocalBundleContextAdvice.java:57)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.doProceed(DelegatingIntroductionInterceptor.java:136)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.invoke(DelegatingIntroductionInterceptor.java:124)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:212)
	at com.sun.proxy.$Proxy2886.getGroup(Unknown Source)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.GroupMembersCache.getGroupMembersFromApi(GroupMembersCache.java:85)
	at java.base/java.util.Map.computeIfAbsent(Map.java:1003)
	at java.base/java.util.Collections$SynchronizedMap.computeIfAbsent(Collections.java:2682)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.GroupMembersCache.get(GroupMembersCache.java:105)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.EvaluatorCacheImpl.hasUserCanUse(EvaluatorCacheImpl.java:209)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.UserCache.finish(UserCache.java:176)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.EvaluatorCacheImpl.finish(EvaluatorCacheImpl.java:169)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.EvaluatorCacheImpl.<init>(EvaluatorCacheImpl.java:85)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.EvaluatorCacheFactoryImpl.lambda$createInstance$0(EvaluatorCacheFactoryImpl.java:38)
	at com.atlassian.sal.core.transaction.HostContextTransactionTemplate$1.doInTransaction(HostContextTransactionTemplate.java:21)
	at com.atlassian.sal.spring.component.SpringHostContextAccessor.lambda$doInTransaction$0(SpringHostContextAccessor.java:70)
	at org.springframework.transaction.support.TransactionTemplate.execute(TransactionTemplate.java:140)
	at com.atlassian.sal.spring.component.SpringHostContextAccessor.doInTransaction(SpringHostContextAccessor.java:68)
	at com.atlassian.confluence.spring.transaction.interceptor.ConfluenceSpringHostContextAccessor.access$001(ConfluenceSpringHostContextAccessor.java:21)
	at com.atlassian.confluence.spring.transaction.interceptor.ConfluenceSpringHostContextAccessor.lambda$doInTransaction$3(ConfluenceSpringHostContextAccessor.java:72)
	at com.atlassian.confluence.impl.vcache.VCacheRequestContextManager.doInRequestContextInternal(VCacheRequestContextManager.java:84)
	at com.atlassian.confluence.impl.vcache.VCacheRequestContextManager.doInRequestContext(VCacheRequestContextManager.java:68)
	at com.atlassian.confluence.spring.transaction.interceptor.ConfluenceSpringHostContextAccessor.doInTransaction(ConfluenceSpringHostContextAccessor.java:72)
	at com.atlassian.sal.core.transaction.HostContextTransactionTemplate.execute(HostContextTransactionTemplate.java:18)
	at jdk.internal.reflect.GeneratedMethodAccessor285.invoke(Unknown Source)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at com.atlassian.plugin.util.ContextClassLoaderSettingInvocationHandler.invoke(ContextClassLoaderSettingInvocationHandler.java:26)
	at com.sun.proxy.$Proxy272.execute(Unknown Source)
	at jdk.internal.reflect.GeneratedMethodAccessor285.invoke(Unknown Source)
	at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.base/java.lang.reflect.Method.invoke(Method.java:566)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:343)
	at org.eclipse.gemini.blueprint.service.importer.support.internal.aop.ServiceInvoker.doInvoke(ServiceInvoker.java:56)
	at org.eclipse.gemini.blueprint.service.importer.support.internal.aop.ServiceInvoker.invoke(ServiceInvoker.java:60)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.doProceed(DelegatingIntroductionInterceptor.java:136)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.invoke(DelegatingIntroductionInterceptor.java:124)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.eclipse.gemini.blueprint.service.util.internal.aop.ServiceTCCLInterceptor.invokeUnprivileged(ServiceTCCLInterceptor.java:70)
	at org.eclipse.gemini.blueprint.service.util.internal.aop.ServiceTCCLInterceptor.invoke(ServiceTCCLInterceptor.java:53)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.eclipse.gemini.blueprint.service.importer.support.LocalBundleContextAdvice.invoke(LocalBundleContextAdvice.java:57)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.doProceed(DelegatingIntroductionInterceptor.java:136)
	at org.springframework.aop.support.DelegatingIntroductionInterceptor.invoke(DelegatingIntroductionInterceptor.java:124)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:212)
	at com.sun.proxy.$Proxy2885.execute(Unknown Source)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.EvaluatorCacheFactoryImpl.createInstance(EvaluatorCacheFactoryImpl.java:36)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.CacheUpdateReceiver.initCache(CacheUpdateReceiver.java:85)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.CacheUpdateReceiver.processAnyEvents(CacheUpdateReceiver.java:113)
	at com.atlassian.confluence.plugins.gatekeeper.evaluator.cache.CacheUpdateReceiver.run(CacheUpdateReceiver.java:98)
	at java.base/java.lang.Thread.run(Thread.java:829)
Caused by: org.hibernate.exception.SQLGrammarException: could not extract ResultSet
	at org.hibernate.exception.internal.SQLExceptionTypeDelegate.convert(SQLExceptionTypeDelegate.java:63)
	at org.hibernate.exception.internal.StandardSQLExceptionConverter.convert(StandardSQLExceptionConverter.java:42)
	at org.hibernate.engine.jdbc.spi.SqlExceptionHelper.convert(SqlExceptionHelper.java:111)
	at org.hibernate.engine.jdbc.spi.SqlExceptionHelper.convert(SqlExceptionHelper.java:97)
	at org.hibernate.engine.jdbc.internal.ResultSetReturnImpl.extract(ResultSetReturnImpl.java:69)
	at org.hibernate.loader.Loader.getResultSet(Loader.java:2168)
	at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1931)
	at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1893)
	at org.hibernate.loader.Loader.doQuery(Loader.java:938)
	at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:341)
	at org.hibernate.loader.Loader.doList(Loader.java:2692)
	at org.hibernate.loader.Loader.doList(Loader.java:2675)
	at org.hibernate.loader.Loader.listIgnoreQueryCache(Loader.java:2507)
	at org.hibernate.loader.Loader.list(Loader.java:2502)
	at org.hibernate.loader.criteria.CriteriaLoader.list(CriteriaLoader.java:109)
	at org.hibernate.internal.SessionImpl.list(SessionImpl.java:1936)
	at org.hibernate.internal.CriteriaImpl.list(CriteriaImpl.java:370)
	at org.hibernate.internal.CriteriaImpl.uniqueResult(CriteriaImpl.java:392)
	at com.atlassian.crowd.embedded.hibernate2.HibernateGroupDao.lambda$internalFindByName$17(HibernateGroupDao.java:483)
	at org.springframework.orm.hibernate5.HibernateTemplate.doExecute(HibernateTemplate.java:385)
	... 154 more
Caused by: java.sql.SQLSyntaxErrorException: Unknown column 'this_.external_id' in 'field list'
	at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:120)
	at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:97)
	at com.mysql.cj.jdbc.exceptions.SQLExceptionsMapping.translateException(SQLExceptionsMapping.java:122)
	at com.mysql.cj.jdbc.ClientPreparedStatement.executeInternal(ClientPreparedStatement.java:953)
	at com.mysql.cj.jdbc.ClientPreparedStatement.executeQuery(ClientPreparedStatement.java:1003)
	at com.mchange.v2.c3p0.impl.NewProxyPreparedStatement.executeQuery(NewProxyPreparedStatement.java:1471)
	at org.hibernate.engine.jdbc.internal.ResultSetReturnImpl.extract(ResultSetReturnImpl.java:60)
	... 169 more

Workaround

Roll back the database and Confluence home&install directories to the pre-upgrade state.
Update the database name and remove the hyphen from the name in MySQL
Update the confluence.cfg.xml file with the new name

Notes

The atlassian-confluence.log will be spammed rapidly with the error message.

is related to

CONFSERVER-65134 Upgrading to Confluence 7.11.0 and above will fail when database name involve hyphen in MS SQL Server

Closed

Details

Description

Problem

Environment

Steps to Reproduce

Expected Results

Actual Results

Workaround

Notes

Attachments

Issue Links

Forms

Activity

People

Dates