The studio-project-creation thread that SetupBamboo starts fails to create the projects but thinks it has succeeded.
From atlassian-bamboo.log:
2010-06-23 15:18:20,993 INFO [BAM::Events:pool-1-thread-1] [SetupBamboo] Remote agents enabled 2010-06-23 15:18:20,998 INFO [BAM::Events:pool-1-thread-1] [SetupBamboo] Studio Bamboo is now setup! :D 2010-06-23 15:18:21,019 INFO [BAM::Events:pool-1-thread-1] [SetupBamboo] Scheduling project creation task 2010-06-23 15:19:41,210 WARN [studio-project-creation1] [TrustEstablisher] Trust request FAILURE. Problem doing PUT request on URL "http://localhost:2990/jira/plugins/servlet/applinks/trusted?url=http://localhost:6990/builds" for trust: com.atlassian.sal.api.net.ResponseException: Maximum number of retries (2) reached. 2010-06-23 15:19:43,874 INFO [studio-project-creation1] [SetupBamboo] Successfully created all projects