Alexey,
The NPM link isn't very informative. What's the issue you're having?
As for removing the file from the source zip, unzip -x seems like it'd let you do this for yourself without any extra steps, or a simple rm after extracting. Given that, I'm not sure how likely it is this will end up prioritized.
Best regards,
Bryan Turner
Atlassian Bitbucket
Found follow solution:
cd bitbucket-parent
rm package-lock.json
npm install
cd ..
./build.sh