Details
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Bug
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Resolution: Support Request
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Low
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None
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7.0.0
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None
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7
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Description
Hi,
Jira shows blank-page after upgrading from 6.3.4 to 7.0.0. It got nothing to do with configured path. I checked for that.
Following is the log from catalina.out
********************************************************************************** JIRA 7.0.0 build: 70107 started. You can now access JIRA through your web browser. ********************************************************************************** 2015-11-13 22:16:20,248 localhost-startStop-1 INFO [c.a.jira.upgrade.UpgradeManagerImpl] Detected that an upgrade is needed; existing data at build 70009 2015-11-13 22:16:20,248 localhost-startStop-1 INFO [c.a.jira.upgrade.UpgradeManagerImpl] ___ Performing Upgrade ____________________ 2015-11-13 22:16:22,103 localhost-startStop-1 INFO [c.a.jira.upgrade.UpgradeManagerImpl] Performing Upgrade Task: Migrate atlassian-scheduler data from Quartz to Caesium. 2015-11-13 22:16:22,192 localhost-startStop-1 ERROR [c.a.jira.upgrade.UpgradeLauncher] An Error occurred during UpgradeLauncher servlet context initialisation - Method com/mysql/jdbc/PreparedStatement.setBinaryStream(ILjava/io/InputStream;)V is abstract. java.lang.AbstractMethodError: Method com/mysql/jdbc/PreparedStatement.setBinaryStream(ILjava/io/InputStream;)V is abstract at com.mysql.jdbc.PreparedStatement.setBinaryStream(PreparedStatement.java) at org.apache.commons.dbcp.DelegatingPreparedStatement.setBinaryStream(DelegatingPreparedStatement.java:348) at org.apache.commons.dbcp.DelegatingPreparedStatement.setBinaryStream(DelegatingPreparedStatement.java:348) at org.ofbiz.core.entity.jdbc.SQLProcessor.setBlob(SQLProcessor.java:1113) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValue(SqlJdbcUtil.java:879) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValue(SqlJdbcUtil.java:765) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValues(SqlJdbcUtil.java:553) at org.ofbiz.core.entity.GenericDAO.singleInsert(GenericDAO.java:204) at org.ofbiz.core.entity.GenericDAO.insert(GenericDAO.java:178) at org.ofbiz.core.entity.GenericHelperDAO.create(GenericHelperDAO.java:83) at org.ofbiz.core.entity.GenericDelegator.create(GenericDelegator.java:556) at org.ofbiz.core.entity.GenericDelegator.create(GenericDelegator.java:542) at org.ofbiz.core.entity.GenericValue.create(GenericValue.java:97) at com.atlassian.jira.ofbiz.DefaultOfBizDelegator.createValue(DefaultOfBizDelegator.java:393) at com.atlassian.jira.ofbiz.WrappingOfBizDelegator.createValue(WrappingOfBizDelegator.java:219) at com.atlassian.jira.entity.EntityEngineImpl.createValue(EntityEngineImpl.java:34) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.createClusteredJob(UpgradeTask_Build70010.java:192) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.createClusteredJob(UpgradeTask_Build70010.java:186) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.migrateSimpleTrigger(UpgradeTask_Build70010.java:141) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.migrateSimpleTriggers(UpgradeTask_Build70010.java:128) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.run(UpgradeTask_Build70010.java:101) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010.doUpgrade(UpgradeTask_Build70010.java:85) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeTaskSuccess(UpgradeManagerImpl.java:804) at com.atlassian.jira.upgrade.UpgradeManagerImpl.runUpgradeTasks(UpgradeManagerImpl.java:671) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgrade(UpgradeManagerImpl.java:531) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeIfNeeded(UpgradeManagerImpl.java:466) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeIfNeededAndAllowed(UpgradeManagerImpl.java:392) at com.atlassian.jira.upgrade.UpgradeLauncher.checkIfUpgradeNeeded(UpgradeLauncher.java:105) at com.atlassian.jira.upgrade.UpgradeLauncher.start(UpgradeLauncher.java:52) at com.atlassian.jira.startup.ActiveServicesLauncher.start(ActiveServicesLauncher.java:55) at com.atlassian.jira.startup.DefaultJiraLauncher.lambda$postDbLaunch$175(DefaultJiraLauncher.java:140) at com.atlassian.jira.startup.DefaultJiraLauncher$$Lambda$14/750197038.run(Unknown Source) at com.atlassian.jira.config.database.DatabaseConfigurationManagerImpl.doNowOrEnqueue(DatabaseConfigurationManagerImpl.java:356) at com.atlassian.jira.config.database.DatabaseConfigurationManagerImpl.doNowOrWhenDatabaseActivated(DatabaseConfigurationManagerImpl.java:226) at com.atlassian.jira.startup.DefaultJiraLauncher.postDbLaunch(DefaultJiraLauncher.java:126) at com.atlassian.jira.startup.DefaultJiraLauncher.lambda$start$173(DefaultJiraLauncher.java:92) at com.atlassian.jira.startup.DefaultJiraLauncher$$Lambda$1/1178924241.run(Unknown Source) at com.atlassian.jira.util.devspeed.JiraDevSpeedTimer.run(JiraDevSpeedTimer.java:34) at com.atlassian.jira.startup.DefaultJiraLauncher.start(DefaultJiraLauncher.java:90) at com.atlassian.jira.startup.LauncherContextListener.contextInitialized(LauncherContextListener.java:84) ... 5 filtered at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) 2015-11-13 22:16:22,237 localhost-startStop-1 ERROR [c.a.jira.startup.LauncherContextListener] Unable to start JIRA due to Java Error. java.lang.AbstractMethodError: Method com/mysql/jdbc/PreparedStatement.setBinaryStream(ILjava/io/InputStream;)V is abstract at com.mysql.jdbc.PreparedStatement.setBinaryStream(PreparedStatement.java) at org.apache.commons.dbcp.DelegatingPreparedStatement.setBinaryStream(DelegatingPreparedStatement.java:348) at org.apache.commons.dbcp.DelegatingPreparedStatement.setBinaryStream(DelegatingPreparedStatement.java:348) at org.ofbiz.core.entity.jdbc.SQLProcessor.setBlob(SQLProcessor.java:1113) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValue(SqlJdbcUtil.java:879) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValue(SqlJdbcUtil.java:765) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValues(SqlJdbcUtil.java:553) at org.ofbiz.core.entity.GenericDAO.singleInsert(GenericDAO.java:204) at org.ofbiz.core.entity.GenericDAO.insert(GenericDAO.java:178) at org.ofbiz.core.entity.GenericHelperDAO.create(GenericHelperDAO.java:83) at org.ofbiz.core.entity.GenericDelegator.create(GenericDelegator.java:556) at org.ofbiz.core.entity.GenericDelegator.create(GenericDelegator.java:542) at org.ofbiz.core.entity.GenericValue.create(GenericValue.java:97) at com.atlassian.jira.ofbiz.DefaultOfBizDelegator.createValue(DefaultOfBizDelegator.java:393) at com.atlassian.jira.ofbiz.WrappingOfBizDelegator.createValue(WrappingOfBizDelegator.java:219) at com.atlassian.jira.entity.EntityEngineImpl.createValue(EntityEngineImpl.java:34) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.createClusteredJob(UpgradeTask_Build70010.java:192) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.createClusteredJob(UpgradeTask_Build70010.java:186) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.migrateSimpleTrigger(UpgradeTask_Build70010.java:141) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.migrateSimpleTriggers(UpgradeTask_Build70010.java:128) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.run(UpgradeTask_Build70010.java:101) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010.doUpgrade(UpgradeTask_Build70010.java:85) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeTaskSuccess(UpgradeManagerImpl.java:804) at com.atlassian.jira.upgrade.UpgradeManagerImpl.runUpgradeTasks(UpgradeManagerImpl.java:671) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgrade(UpgradeManagerImpl.java:531) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeIfNeeded(UpgradeManagerImpl.java:466) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeIfNeededAndAllowed(UpgradeManagerImpl.java:392) at com.atlassian.jira.upgrade.UpgradeLauncher.checkIfUpgradeNeeded(UpgradeLauncher.java:105) at com.atlassian.jira.upgrade.UpgradeLauncher.start(UpgradeLauncher.java:52) at com.atlassian.jira.startup.ActiveServicesLauncher.start(ActiveServicesLauncher.java:55) at com.atlassian.jira.startup.DefaultJiraLauncher.lambda$postDbLaunch$175(DefaultJiraLauncher.java:140) at com.atlassian.jira.startup.DefaultJiraLauncher$$Lambda$14/750197038.run(Unknown Source) at com.atlassian.jira.config.database.DatabaseConfigurationManagerImpl.doNowOrEnqueue(DatabaseConfigurationManagerImpl.java:356) at com.atlassian.jira.config.database.DatabaseConfigurationManagerImpl.doNowOrWhenDatabaseActivated(DatabaseConfigurationManagerImpl.java:226) at com.atlassian.jira.startup.DefaultJiraLauncher.postDbLaunch(DefaultJiraLauncher.java:126) at com.atlassian.jira.startup.DefaultJiraLauncher.lambda$start$173(DefaultJiraLauncher.java:92) at com.atlassian.jira.startup.DefaultJiraLauncher$$Lambda$1/1178924241.run(Unknown Source) at com.atlassian.jira.util.devspeed.JiraDevSpeedTimer.run(JiraDevSpeedTimer.java:34) at com.atlassian.jira.startup.DefaultJiraLauncher.start(DefaultJiraLauncher.java:90) at com.atlassian.jira.startup.LauncherContextListener.contextInitialized(LauncherContextListener.java:84) ... 5 filtered at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) 2015-11-13 22:16:22,241 localhost-startStop-1 ERROR [o.a.c.c.C.[Catalina].[localhost].[/]] Exception sending context initialized event to listener instance of class com.atlassian.jira.startup.LauncherContextListener java.lang.AbstractMethodError: Method com/mysql/jdbc/PreparedStatement.setBinaryStream(ILjava/io/InputStream;)V is abstract at com.mysql.jdbc.PreparedStatement.setBinaryStream(PreparedStatement.java) at org.apache.commons.dbcp.DelegatingPreparedStatement.setBinaryStream(DelegatingPreparedStatement.java:348) at org.apache.commons.dbcp.DelegatingPreparedStatement.setBinaryStream(DelegatingPreparedStatement.java:348) at org.ofbiz.core.entity.jdbc.SQLProcessor.setBlob(SQLProcessor.java:1113) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValue(SqlJdbcUtil.java:879) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValue(SqlJdbcUtil.java:765) at org.ofbiz.core.entity.jdbc.SqlJdbcUtil.setValues(SqlJdbcUtil.java:553) at org.ofbiz.core.entity.GenericDAO.singleInsert(GenericDAO.java:204) at org.ofbiz.core.entity.GenericDAO.insert(GenericDAO.java:178) at org.ofbiz.core.entity.GenericHelperDAO.create(GenericHelperDAO.java:83) at org.ofbiz.core.entity.GenericDelegator.create(GenericDelegator.java:556) at org.ofbiz.core.entity.GenericDelegator.create(GenericDelegator.java:542) at org.ofbiz.core.entity.GenericValue.create(GenericValue.java:97) at com.atlassian.jira.ofbiz.DefaultOfBizDelegator.createValue(DefaultOfBizDelegator.java:393) at com.atlassian.jira.ofbiz.WrappingOfBizDelegator.createValue(WrappingOfBizDelegator.java:219) at com.atlassian.jira.entity.EntityEngineImpl.createValue(EntityEngineImpl.java:34) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.createClusteredJob(UpgradeTask_Build70010.java:192) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.createClusteredJob(UpgradeTask_Build70010.java:186) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.migrateSimpleTrigger(UpgradeTask_Build70010.java:141) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.migrateSimpleTriggers(UpgradeTask_Build70010.java:128) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010$Upgrader.run(UpgradeTask_Build70010.java:101) at com.atlassian.jira.upgrade.tasks.UpgradeTask_Build70010.doUpgrade(UpgradeTask_Build70010.java:85) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeTaskSuccess(UpgradeManagerImpl.java:804) at com.atlassian.jira.upgrade.UpgradeManagerImpl.runUpgradeTasks(UpgradeManagerImpl.java:671) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgrade(UpgradeManagerImpl.java:531) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeIfNeeded(UpgradeManagerImpl.java:466) at com.atlassian.jira.upgrade.UpgradeManagerImpl.doUpgradeIfNeededAndAllowed(UpgradeManagerImpl.java:392) at com.atlassian.jira.upgrade.UpgradeLauncher.checkIfUpgradeNeeded(UpgradeLauncher.java:105) at com.atlassian.jira.upgrade.UpgradeLauncher.start(UpgradeLauncher.java:52) at com.atlassian.jira.startup.ActiveServicesLauncher.start(ActiveServicesLauncher.java:55) at com.atlassian.jira.startup.DefaultJiraLauncher.lambda$postDbLaunch$175(DefaultJiraLauncher.java:140) at com.atlassian.jira.startup.DefaultJiraLauncher$$Lambda$14/750197038.run(Unknown Source) at com.atlassian.jira.config.database.DatabaseConfigurationManagerImpl.doNowOrEnqueue(DatabaseConfigurationManagerImpl.java:356) at com.atlassian.jira.config.database.DatabaseConfigurationManagerImpl.doNowOrWhenDatabaseActivated(DatabaseConfigurationManagerImpl.java:226) at com.atlassian.jira.startup.DefaultJiraLauncher.postDbLaunch(DefaultJiraLauncher.java:126) at com.atlassian.jira.startup.DefaultJiraLauncher.lambda$start$173(DefaultJiraLauncher.java:92) at com.atlassian.jira.startup.DefaultJiraLauncher$$Lambda$1/1178924241.run(Unknown Source) at com.atlassian.jira.util.devspeed.JiraDevSpeedTimer.run(JiraDevSpeedTimer.java:34) at com.atlassian.jira.startup.DefaultJiraLauncher.start(DefaultJiraLauncher.java:90) at com.atlassian.jira.startup.LauncherContextListener.contextInitialized(LauncherContextListener.java:84) ... 5 filtered at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) 13-Nov-2015 22:16:22.252 SEVERE [localhost-startStop-1] org.apache.catalina.core.StandardContext.startInternal Error listenerStart 13-Nov-2015 22:16:22.300 SEVERE [localhost-startStop-1] org.apache.catalina.core.StandardContext.startInternal Context [] startup failed due to previous errors 2015-11-13 22:16:22,348 localhost-startStop-1 INFO [c.a.jira.startup.DefaultJiraLauncher] Stopping launchers 2015-11-13 22:16:22,491 localhost-startStop-1 INFO [c.a.plugin.manager.DefaultPluginManager] Preparing to shut down the plugin system 2015-11-13 22:16:22,510 localhost-startStop-1 INFO [c.a.plugin.manager.DefaultPluginManager] Shutting down the plugin system 2015-11-13 22:16:25,765 Gemini Blueprint context shutdown thread1 DEBUG [c.a.activeobjects.osgi.ActiveObjectsServiceFactory] ungetService bundle [com.atlassian.plugins.atlassian-whitelist-api-plugin] 2015-11-13 22:16:25,771 Gemini Blueprint context shutdown thread1 DEBUG [c.a.activeobjects.osgi.ActiveObjectsServiceFactory] ungetService bundle [com.atlassian.plugins.base-hipchat-integration-plugin-api] 2015-11-13 22:16:25,771 Gemini Blueprint context shutdown thread1 DEBUG [c.a.activeobjects.osgi.ActiveObjectsServiceFactory] destroy log4j:WARN No appenders could be found for logger (com.amazonaws.jmx.spi.SdkMBeanRegistry). log4j:WARN Please initialize the log4j system properly. log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. 2015-11-13 22:16:31,928 Modification Check:thread-1 INFO [c.a.jira.startup.JiraStartupLogger] ___ Modifications ___________________________ Modified Files : jira-application.properties Removed Files : None 2015-11-13 22:16:45,647 Gemini Blueprint context shutdown thread2 INFO [c.a.j.plugins.monitor.MonitoringScheduler] Unscheduling metrics collector... 2015-11-13 22:16:45,647 Gemini Blueprint context shutdown thread2 INFO [c.a.j.plugins.monitor.MonitorLauncher] Stopped JIRA monitoring 2015-11-13 22:16:47,715 Gemini Blueprint context shutdown thread1 INFO [c.a.j.p.dvcs.scheduler.DvcsScheduler] DvcsScheduler job handler unregistered 2015-11-13 22:16:48,194 Gemini Blueprint context shutdown thread2 INFO [c.a.g.service.logging.LogSupport] ********************************************************************************* Atlassian GreenHopper v7.0.4-D20150923T101309 #58e240c5cc26afe4 built 2015-09-23T10:15:38.027Z - plugin stopping... ********************************************************************************* 2015-11-13 22:16:57,801 FelixShutdown ERROR [o.e.g.b.e.i.util.concurrent.RunnableTimedExecution] Closing runnable for context NonValidatingOsgiBundleXmlApplicationContext(bundle=com.pyxis.greenhopper.jira, config=osgibundle:/META-INF/spring/*.xml) did not finish in 10000ms; consider taking a snapshot and then shutdown the VM in case the thread still hangs 2015-11-13 22:16:57,887 Gemini Blueprint context shutdown thread1 WARN [o.s.context.annotation.CommonAnnotationBeanPostProcessor] Invocation of destroy method failed on bean with name 'devtoolsWorkflowEventBridge': org.eclipse.gemini.blueprint.service.ServiceUnavailableException: service matching filter=[(&(objectClass=com.atlassian.event.remote.RemoteEventListenerRegistrar)(objectClass=com.atlassian.event.remote.RemoteEventListenerRegistrar))] unavailable 2015-11-13 22:16:58,054 Gemini Blueprint context shutdown thread1 WARN [o.s.b.factory.support.DisposableBeanAdapter] Invocation of destroy method failed on bean with name 'logScanService': java.lang.NullPointerException 2015-11-13 22:17:08,586 Gemini Blueprint context shutdown thread2 WARN [o.s.context.annotation.CommonAnnotationBeanPostProcessor] Invocation of destroy method failed on bean with name 'greenhopper-launcher': java.lang.RuntimeException: Retry failed; interrupted while waiting 13-Nov-2015 22:17:10.105 WARNING [localhost-startStop-1] org.apache.catalina.loader.WebappClassLoaderBase.clearReferencesThreads The web application [ROOT] appears to have started a thread named [MySQL Statement Cancellation Timer] but has failed to stop it. This is very likely to create a memory leak. Stack trace of thread: java.lang.Object.wait(Native Method) java.lang.Object.wait(Object.java:502) java.util.TimerThread.mainLoop(Timer.java:526) java.util.TimerThread.run(Timer.java:505) 13-Nov-2015 22:17:10.122 WARNING [localhost-startStop-1] org.apache.catalina.loader.WebappClassLoaderBase.clearReferencesThreads The web application [ROOT] appears to have started a thread named [JonasBatch] but has failed to stop it. This is very likely to create a memory leak. Stack trace of thread: java.lang.Object.wait(Native Method) java.lang.Object.wait(Object.java:502) org.objectweb.jonas_timer.TimerManager.batch(TimerManager.java:193) org.objectweb.jonas_timer.Batch.run(TimerManager.java:65) 13-Nov-2015 22:17:10.136 WARNING [localhost-startStop-1] org.apache.catalina.loader.WebappClassLoaderBase.clearReferencesThreads The web application [ROOT] appears to have started a thread named [JonasClock] but has failed to stop it. This is very likely to create a memory leak. Stack trace of thread: java.lang.Thread.sleep(Native Method) org.objectweb.jonas_timer.TimerManager.clock(TimerManager.java:142) org.objectweb.jonas_timer.Clock.run(TimerManager.java:46) 13-Nov-2015 22:17:10.186 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8081"] 13-Nov-2015 22:17:10.245 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in 221487 ms log4j:WARN No appenders could be found for logger (org.springframework.context.annotation.CommonAnnotationBeanPostProcessor). log4j:WARN Please initialize the log4j system properly.